synbiopython.codon.taxonomy_utils¶

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Synbiopython is licensed under the MIT License.

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@author: neilswainston

synbiopython.codon.taxonomy_utils.get_organism_name(table_id)[source]¶

Gets an organism name from supplied parameter, which may be either an organism name or a NCBI Taxonomy id.

Parameters: table_id (str) – an organism name or a NCBI Taxonomy id (as either a str or int).
Returns: an organism name
Return type: str

synbiopython.codon.taxonomy_utils.get_tax_id(table_id)[source]¶

Gets a NCBI Taxonomy id from supplied parameter, which may be either an organism name or a NCBI Taxonomy id.

Parameters: table_id (str) – an organism name or a NCBI Taxonomy id (as either a str or int).
Returns: a NCBI Taxonomy id
Return type: str